Independent · non-commercial · publishes on a quarterly cycle|Current cycle 2026 Q3
Compound Evidence InstituteEvidence synthesis · established 2023Graded assessments of compounds, trials, methods and supply
Document set current to 30 July 2026
Methodological standard · Physical quality

CEI-MS-11 — Determination of aggregate content by size-exclusion chromatography

Determination of aggregate content by size-exclusion chromatography

Document identifier
CEI-MS-11
Series
Methodological standard
Version
1.1
Published
26 Aug 2026
Last reviewed
26 Aug 2026
Next review
26 Aug 2029
Identifier
10.71829/cei.meth.10
Certainty
High
Cycle
2026 Q3
Category
Physical quality

§1Scope

§1.1Scope

Applies to peptides and proteins prone to self-association, and mandatorily to the amylin analogue class, to Fc-fusion and antibody-conjugate products, and to cationic amphipathic peptides. Reverse-phase purity does not detect aggregates and for these classes a reverse-phase result alone is recorded by the Institute as an incomplete characterisation.

§2Principle

Molecules are separated by hydrodynamic volume as they traverse a porous stationary phase under isocratic aqueous conditions. Larger species access less pore volume and elute earlier. Because separation is non-denaturing, non-covalent aggregates present in solution are preserved and detected — which is precisely what a denaturing reverse-phase separation destroys.[1,2]

§3Apparatus and reagents

§3.1Apparatus

  • HPLC or UHPLC with an aqueous-compatible pump and a low-dispersion flow path
  • Size-exclusion column of pore size appropriate to the molecular-mass range
  • Ultraviolet detector at 280 nm where aromatic content permits, otherwise 214 nm
  • Multi-angle light-scattering and refractive-index detectors where absolute molar mass is required

§3.2Reagents and reference materials

  • Isotonic aqueous mobile phase at physiological pH, typically phosphate-buffered saline or a phosphate–arginine buffer
  • Molecular-mass calibration standards spanning the range
  • A control sample of known monomer content

References cited on this page

References are numbered in order of first citation in this document. Each superscript in the text links to its entry below.

  1. International Council for Harmonisation of Technical Requirements for Pharmaceuticals for Human Use. ICH Q6B Specifications: Test Procedures and Acceptance Criteria for Biotechnological/Biological Products. ICH Harmonised Tripartite Guideline 1999;Step 4 version. identifier not held by the Institute
  2. United States Pharmacopeial Convention. General Chapter ⟨788⟩ Particulate Matter in Injections. United States Pharmacopeia — National Formulary (USP–NF) 2024;USP 2024 Issue 1. identifier not held by the Institute

Identifiers are reproduced only where the Institute holds them. Where a digital object identifier or PubMed identifier is not shown, the Institute has recorded the journal and year and has not constructed an identifier.

Nothing published by the Institute is medical advice, a diagnosis, a prescription, a treatment recommendation or a purchasing recommendation. Compounds supplied for research use are not approved for human or veterinary use in any jurisdiction, and a favourable analytical assessment of a supplier is not a statement that any product is safe or effective. The Institute publishes certainty ratings and never recommendations. No telephone number, messaging handle or ordering channel appears anywhere on this site.